Gene: Pp3c12_20700

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_20700
  • Transcript Identifier Pp3c12_20700V3.4
  • Gene Type Coding gene
  • Location Chr12 : 13653506-13661040 : negative

Gene Family Information

  • ID HOM05D000324
  • #Genes/#Species 1429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_20700V3.4
  • pacid 32972504
  • alias Pp1s108_163V6
  • alias Phpat.012G072600
  • alias Phypa_134109
  • uniprot A0A2K1JRJ0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001676
IEA
GOA Databaselong-chain fatty acid metabolic process
GO:0010143
ISO
PLAZA Integrative Orthologycutin biosynthetic process AT2G47240
GO:0006633
ISO
PLAZA Integrative Orthologyfatty acid biosynthetic process AT4G23850
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT1G49430
GO:0006631
ISO
PLAZA Integrative Orthologyfatty acid metabolic process AT4G23850
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT2G47240
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT1G49430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004467
IBA
GOA Databaselong-chain fatty acid-CoA ligase activity
GO:0031957
ISO
PLAZA Integrative Orthologyvery long-chain fatty acid-CoA ligase activity AT2G47240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IBA
GOA Databasemembrane
GO:0005783
IBA
GOA Databaseendoplasmic reticulum
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G49430
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G23850
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G23850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042099 ANL, N-terminal domain
IPR000873 AMP-dependent synthetase/ligase
Mapman id Description
50.6.2 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond