Gene: Pp3c11_5370
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_5370
- Transcript Identifier Pp3c11_5370V3.1
- Gene Type Coding gene
- Location Chr11 : 3413670-3417234 : positive
Gene Family Information
- ID HOM05D003237
- #Genes/#Species 212/98
- Phylogenetic origin
- ID ORTHO05D003631
- #Genes/#Species 212/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c11_5370V3.1
- pacid 32959644
- alias Phpat.011G020200
- uniprot A0A2K1JTI6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT2G27100 |
| GO:2000011 | ISO | PLAZA Integrative Orthology | regulation of adaxial/abaxial pattern formation | AT2G27100 |
| GO:0000381 | ISO | PLAZA Integrative Orthology | regulation of alternative mRNA splicing, via spliceosome | AT2G27100 |
| GO:0048367 | ISO | PLAZA Integrative Orthology | shoot system development | AT2G27100 |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G27100 |
| GO:0048509 | ISO | PLAZA Integrative Orthology | regulation of meristem development | AT2G27100 |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT2G27100 |
| GO:0031053 | IBA | GOA Database | primary miRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G27100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G27100 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G27100 |
| GO:0010445 | ISO | PLAZA Integrative Orthology | nuclear dicing body | AT2G27100 |
| GO:0005846 | ISO | PLAZA Integrative Orthology | nuclear cap binding complex | AT2G27100 |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT2G27100 |
| GO:0016604 | IBA | GOA Database | nuclear body | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.9.2.1.3 | RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.component SERRATE |