Gene: Pp3c11_500

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c11_500
Transcript Identifier Pp3c11_500V3.1
Gene Type Coding gene
Location Chr11 : 158114-162439 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000032
#Genes/#Species 5307/100
Phylogenetic origin

ID ORTHO05D005297
#Genes/#Species 160/99
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name Pp3c11_500V3.1
pacid 32959057
uniprot A0A2K1JSW3

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc02g078880.4

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003723	IEA	GOA Database	RNA binding
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016787	IEA	GOA Database	hydrolase activity
GO:0004386	IEA	GOA Database	helicase activity
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc02g078880.4
GO:0008266	ISO	PLAZA Integrative Orthology	poly(U) RNA binding	AT1G71280

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	IBA	GOA Database	nucleolus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001650	Helicase, C-terminal
IPR025313	Domain of unknown function DUF4217
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR011545	DEAD/DEAH box helicase domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
35.1	not assigned.annotated