Gene: Solyc02g078880.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g078880.4
  • Transcript Identifier Solyc02g078880.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 41502951-41505775 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g078880.4.1
  • uniprot A0A3Q7F4U0
  • gene_id Solyc02g078880

Descriptions

  • Description RNA helicase DEAD8
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
IDA
Gene OntologyRNA metabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IDA
Gene OntologyRNA helicase activity1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008266
ISO
PLAZA Integrative Orthologypoly(U) RNA binding AT1G71280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025313 Domain of unknown function DUF4217
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated