Gene: Pp3c10_24880
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c10_24880
- Transcript Identifier Pp3c10_24880V3.2
- Gene Type Coding gene
- Location Chr10 : 16777332-16780216 : negative
Gene Family Information
- ID HOM05D000423
- #Genes/#Species 1212/97
- Phylogenetic origin
- ID ORTHO05D000284
- #Genes/#Species 1196/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c10_24880V3.2
- pacid 32900742
- alias Pp1s32_43V6
- alias Phpat.010G093900
- alias Phypa_71313
- uniprot A9RW33
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010358 | ISO | PLAZA Integrative Orthology | leaf shaping | AT1G73590 |
| GO:0010338 | ISO | PLAZA Integrative Orthology | leaf formation | AT1G73590 |
| GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT2G01420 |
| GO:0080162 | ISO | PLAZA Integrative Orthology | intracellular auxin transport | AT5G16530 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT1G73590 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT1G73590 |
| GO:1901332 | ISO | PLAZA Integrative Orthology | negative regulation of lateral root development | AT1G77110 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT1G77110 |
| GO:0007389 | ISO | PLAZA Integrative Orthology | pattern specification process | AT1G70940 |
| GO:0048766 | ISO | PLAZA Integrative Orthology | root hair initiation | AT1G70940 |
| GO:0048826 | ISO | PLAZA Integrative Orthology | cotyledon morphogenesis | AT1G73590 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT1G73590 |
| GO:0048825 | ISO | PLAZA Integrative Orthology | cotyledon development | AT1G73590 |
| GO:0009723 | ISO | PLAZA Integrative Orthology | response to ethylene | AT5G57090 |
| GO:0009942 | ISO | PLAZA Integrative Orthology | longitudinal axis specification | AT1G23080 |
| GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT1G70940 |
| GO:0048830 | ISO | PLAZA Integrative Orthology | adventitious root development | Os02g0743400 |
| GO:0010229 | ISO | PLAZA Integrative Orthology | inflorescence development | AT1G73590 |
| GO:0010105 | ISO | PLAZA Integrative Orthology | negative regulation of ethylene-activated signaling pathway | AT1G77110 |
| GO:0010540 | ISO | PLAZA Integrative Orthology | basipetal auxin transport | AT1G77110 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G73590 |
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0009734 | IEA | GOA Database | auxin-activated signaling pathway | |
| GO:0009926 | IBA | GOA Database | auxin polar transport | |
| GO:0010252 | IBA | GOA Database | auxin homeostasis | |
| GO:0010315 | IBA | GOA Database | auxin efflux | |
| GO:0010082 | ISO | PLAZA Integrative Orthology | regulation of root meristem growth | AT1G70940 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT5G16530 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT1G73590 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT1G70940 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT5G57090 |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT1G73590 |
| GO:0009606 | ISO | PLAZA Integrative Orthology | tropism | AT1G70940 |
| GO:0009749 | ISO | PLAZA Integrative Orthology | response to glucose | AT5G57090 |
| GO:0001666 | ISO | PLAZA Integrative Orthology | response to hypoxia | AT5G57090 |
| GO:0048367 | ISO | PLAZA Integrative Orthology | shoot system development | AT1G73590 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080161 | ISO | PLAZA Integrative Orthology | auxin transmembrane transporter activity | AT5G16530 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73590 |
| GO:0010329 | IBA | GOA Database | auxin efflux transmembrane transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000323 | ISO | PLAZA Integrative Orthology | lytic vacuole | AT5G57090 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G73590 |
| GO:0009921 | ISO | PLAZA Integrative Orthology | auxin efflux carrier complex | Os06g0660200 |
| GO:0009986 | ISO | PLAZA Integrative Orthology | cell surface | AT1G70940 |
| GO:0012506 | ISO | PLAZA Integrative Orthology | vesicle membrane | AT1G70940 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0005783 | IBA | GOA Database | endoplasmic reticulum | |
| GO:0016328 | ISO | PLAZA Integrative Orthology | lateral plasma membrane | AT1G70940 |
| GO:0009925 | ISO | PLAZA Integrative Orthology | basal plasma membrane | AT1G73590 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G23080 |
| GO:0045177 | ISO | PLAZA Integrative Orthology | apical part of cell | AT1G73590 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004776 | Membrane transport protein |
| Mapman id | Description |
|---|---|
| 11.2.4.1.1 | Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN) |
| 24.2.5.2.1 | Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN) |