Gene: AT5G16530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G16530
  • Transcript Identifier AT5G16530.1
  • Gene Type Coding gene
  • Location Chr5 : 5400735-5402626 : positive

Gene Family Information

  • ID HOM05D000423
  • #Genes/#Species 1212/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G16530.1
  • symbol PIN5
  • full_name PIN-FORMED 5
  • uniprot Q9FFD0

Descriptions

  • Description Auxin efflux carrier family protein
  • Computational description PIN-FORMED 5 (PIN5); CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup (InterPro:IPR014024), Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G15100.1); Has 2169 Blast hits to 1907 proteins in 543 species: Archae - 24; Bacteria - 1096; Metazoa - 104; Fungi - 0; Plants - 651; Viruses - 0; Other Eukaryotes - 294 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010252
IMP
IBA
Gene Ontologyauxin homeostasis1 2
GO:0055085
IEA
Gene Ontologytransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0009734
IEA
GOA Databaseauxin-activated signaling pathway
GO:0010315
IBA
Gene Ontologyauxin efflux2
GO:0009926
IBA
Gene Ontologyauxin polar transport2
GO:0009555
IMP, IGI
Gene Ontologypollen development3
GO:0080162
IDA
Gene Ontologyintracellular auxin transport1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010329
IBA
Gene Ontologyauxin efflux transmembrane transporter activity2
GO:0080161
IDA
Gene Ontologyauxin transmembrane transporter activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005783
IDA
IBA
Gene Ontologyendoplasmic reticulum1 2
GO:0016020
IEA
GOA Databasemembrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IBA
Gene Ontologyplasma membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014024 Auxin efflux carrier, plant type
IPR004776 Membrane transport protein
Mapman id Description
11.2.4.1.1 Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN)
24.2.5.2.1 Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN)