Gene: Pp3c10_16040

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c10_16040
  • Transcript Identifier Pp3c10_16040V3.2
  • Gene Type Coding gene
  • Location Chr10 : 10832737-10835498 : negative

Gene Family Information

  • ID HOM05D000461
  • #Genes/#Species 1145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c10_16040V3.2
  • pacid 32901775
  • alias Phypa_167427
  • alias Pp1s145_84V6
  • alias Phpat.010G061900
  • uniprot A0A2K1JZ76

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT1G62830
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62830
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT3G10390
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G10390
GO:0016575
ISO
PLAZA Integrative Orthologyhistone deacetylation AT3G10390
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT3G10390
GO:0051568
ISO
PLAZA Integrative Orthologyhistone H3-K4 methylation AT3G13682

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IBA
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G62830
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G62830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR002937 Amine oxidase
IPR007526 SWIRM domain
Mapman id Description
12.3.3.7.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.AOD group histone demethylase activities.lysine-specific demethylase (LDL/KDM1)