Gene: Potri.018G013800

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.018G013800
  • Transcript Identifier Potri.018G013800.1
  • Gene Type Coding gene
  • Location Chr18 : 923927-925067 : positive

Gene Family Information

  • ID HOM05D001051
  • #Genes/#Species 579/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.018G013800.v4.1
  • pacid 42801925
  • synonym POPTR_0018s03110

Descriptions

  • Description KOG1601 - GATA-4/5/6 transcription factors
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010099
ISO
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G24790
GO:0032922
ISO
PLAZA Integrative Orthologycircadian regulation of gene expression AT5G24930
GO:0010161
ISO
PLAZA Integrative Orthologyred light signaling pathway AT2G24790
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G24930

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G24790
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT2G24790

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G24790
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G24930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR000315 B-box-type zinc finger
IPR010402 CCT domain
Mapman id Description
15.5.1.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO)