Gene: AT2G24790
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G24790
- Transcript Identifier AT2G24790.1
- Gene Type Coding gene
- Location Chr2 : 10566959-10567946 : positive
Gene Family Information
- ID HOM05D001051
- #Genes/#Species 579/97
- Phylogenetic origin
- ID ORTHO05D000886
- #Genes/#Species 569/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G24790.1
- symbol COL3
- Alias ATCOL3,BBX4,B-box domain protein 4
- uniprot Q9SK53
Descriptions
- Description CONSTANS-like 3
- Computational description CONSTANS-like 3 (COL3); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 3343 Blast hits to 2491 proteins in 138 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 3148; Viruses - 0; Other Eukaryotes - 192 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010099 | IMP | Gene Ontology | regulation of photomorphogenesis | 1 |
| GO:0010161 | IMP | Gene Ontology | red light signaling pathway | 1 |
| GO:0009909 | IBA | Gene Ontology | regulation of flower development | 2 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
| GO:0043565 | IPI | Gene Ontology | sequence-specific DNA binding | 5 |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.2 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO) |