Gene: Potri.016G006400
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.016G006400
- Transcript Identifier Potri.016G006400.1
- Gene Type Coding gene
- Location Chr16 : 308739-314035 : positive
Gene Family Information
- ID HOM05D001202
- #Genes/#Species 520/100
- Phylogenetic origin
- ID ORTHO05D001728
- #Genes/#Species 364/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.016G006400.v4.1
- pacid 42809508
- synonym POPTR_0016s00810
Descriptions
- Description K07199 - 5'-AMP-activated protein kinase, regulatory beta subunit (PRKAB)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | Solyc05g054220.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006828 | Association with the SNF1 complex (ASC) domain |
| IPR043554 | SNF1-related protein kinase regulatory subunit beta |
| IPR037256 | ASC domain superfamily |
| IPR014756 | Immunoglobulin E-set |
| IPR013783 | Immunoglobulin-like fold |
| IPR032640 | AMP-activated protein kinase, glycogen-binding domain |
| Mapman id | Description |
|---|---|
| 18.4.5.1.2 | Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related SnRK1 kinase complex.regulatory subunit beta |
| 27.3.1.2 | Multi-process regulation.SnRK1-kinase regulatory system.SnRK1 protein kinase complex.regulatory subunit beta |