Gene: Potri.015G078000
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.015G078000
- Transcript Identifier Potri.015G078000.1
- Gene Type Coding gene
- Location Chr15 : 10432676-10434369 : positive
Gene Family Information
- ID HOM05D007797
- #Genes/#Species 88/52
- Phylogenetic origin
- ID ORTHO05D009741
- #Genes/#Species 93/54
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Potri.015G078000.v4.1
- pacid 42776014
- synonym POPTR_0015s08910
Descriptions
- Description K00236 - succinate dehydrogenase (ubiquinone) cytochrome b560 subunit (SDHC, SDH3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006121 | ISO | PLAZA Integrative Orthology | mitochondrial electron transport, succinate to ubiquinone | AT5G09600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0000104 | ISO | PLAZA Integrative Orthology | succinate dehydrogenase activity | AT5G09600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0045273 | ISO | PLAZA Integrative Orthology | respiratory chain complex II | AT5G09600 |
| GO:0005749 | ISO | PLAZA Integrative Orthology | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | AT5G09600 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G09600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043129 | ATPase, nucleotide binding domain |
| IPR013126 | Heat shock protein 70 family |
| IPR034804 | Fumarate reductase/succinate dehydrogenase, transmembrane subunit |
| IPR000701 | Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit |
| IPR029047 | Heat shock protein 70kD, peptide-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 2.3.6.1.3 | Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.components.membrane-anchor component SDH3 |