Gene: Potri.014G025400

General Information

Structural Information

Species Populus trichocarpa
Gene Identifier Potri.014G025400
Transcript Identifier Potri.014G025400.1
Gene Type Coding gene
Location Chr14 : 1566771-1572490 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000428
#Genes/#Species 1201/100
Phylogenetic origin

ID ORTHO05D000582
#Genes/#Species 762/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Potri.014G025400.v4.1
pacid 42763989
synonym gw1.40.862.1

Descriptions

Short descriptions
Ortholog descriptions

Description K13126 - polyadenylate-binding protein (PABPC)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT2G23350

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	InterPro	RNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G23350
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G23350

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G23350

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily
IPR036053	PABC (PABP) domain
IPR003954	RNA recognition motif domain, eukaryote

Mapman id	Description
17.4.2.5	Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP)