Gene: Potri.011G152700
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.011G152700
- Transcript Identifier Potri.011G152700.4
- Gene Type Coding gene
- Location Chr11 : 17972335-17977061 : positive
Gene Family Information
- ID HOM05D001023
- #Genes/#Species 593/98
- Phylogenetic origin
- ID ORTHO05D000912
- #Genes/#Species 558/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.011G152700.v4.1
- pacid 42782018
- synonym POPTR_0011s15590
Descriptions
- Description PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT4G10610 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G32790 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR034825 | CID8-like protein, RNA recognition motif 2 |
| IPR035979 | RNA-binding domain superfamily |
| IPR034823 | CID8-like protein, RNA recognition motif 1 |
| IPR009818 | Ataxin-2, C-terminal |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |