Gene: Potri.009G045300

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.009G045300
  • Transcript Identifier Potri.009G045300.2
  • Gene Type Coding gene
  • Location Chr09 : 5158165-5162910 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.009G045300.v4.1
  • pacid 42772782

Descriptions

  • Description K13179 - ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13] (DDX18, HAS1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009790
ISO
PLAZA Integrative Orthologyembryo development AT5G65900
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g114370.4
GO:0048866
ISO
PLAZA Integrative Orthologystem cell fate specification AT5G65900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IEA
InterProRNA helicase activity
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G65900
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G65900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G65900
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G18600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR025313 Domain of unknown function DUF4217
IPR044773 DDX18/Has1, DEAD-box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated