Gene: Potri.008G073100

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.008G073100
  • Transcript Identifier Potri.008G073100.1
  • Gene Type Coding gene
  • Location Chr08 : 4519361-4523474 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.008G073100.v4.1
  • pacid 42806346
  • synonym fgenesh4_pm.C_LG_VIII000290

Descriptions

  • Description K14809 - ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13] (DDX55, SPB4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc02g078880.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc02g078880.4
GO:0008266
ISO
PLAZA Integrative Orthologypoly(U) RNA binding AT1G71280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR025313 Domain of unknown function DUF4217
Mapman id Description
35.1 not assigned.annotated