Gene: Potri.008G067400

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.008G067400
  • Transcript Identifier Potri.008G067400.4
  • Gene Type Coding gene
  • Location Chr08 : 4064718-4066970 : positive

Gene Family Information

  • ID HOM05D000727
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.008G067400.v4.1
  • pacid 42807418
  • synonym POPTR_0008s06730

Descriptions

  • Description K10802 - high mobility group protein B1 (HMGB1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006333
ISO
PLAZA Integrative Orthologychromatin assembly or disassembly AT3G51880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G51880
GO:0030527
ISO
PLAZA Integrative Orthologystructural constituent of chromatin AT3G51880
GO:0003682
ISO
PLAZA Integrative Orthologychromatin binding AT3G51880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G51880
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G51880
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT3G51880

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036910 High mobility group box domain superfamily
IPR031061 High mobility group protein HMGB, plant
IPR009071 High mobility group box domain
Mapman id Description
12.1.3.1 Chromatin organisation.chromatin structure.DNA bending.architectural protein (HMG-B)