Gene: Potri.006G021200
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.006G021200
- Transcript Identifier Potri.006G021200.2
- Gene Type Coding gene
- Location Chr06 : 1431623-1436195 : positive
Gene Family Information
- ID HOM05D003806
- #Genes/#Species 182/90
- Phylogenetic origin
- ID ORTHO05D004346
- #Genes/#Species 183/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.006G021200.v4.1
- pacid 42769554
- synonym estExt_Genewise1_v1.C_LG_VI1490
Descriptions
- Description KOG0962//KOG0978//KOG4593 - DNA repair protein RAD50, ABC-type ATPase/SMC superfamily // E3 ubiquitin ligase involved in syntaxin degradation // Mitotic checkpoint protein MAD1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT2G32240 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT2G32240 |
| GO:0050832 | ISO | PLAZA Integrative Orthology | defense response to fungus | AT2G32240 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G32240 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G32240 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G32240 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |