Gene: Potri.005G239900

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.005G239900
  • Transcript Identifier Potri.005G239900.1
  • Gene Type Coding gene
  • Location Chr05 : 23677607-23680580 : negative

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.005G239900.v4.1
  • pacid 42803800
  • synonym TUB20

Descriptions

  • Description PTHR11588:SF116 - TUBULIN BETA-5 CHAIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007017
IEA
InterPromicrotubule-based process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20010
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G20010

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IEA
InterPromicrotubule
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G20010
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G20010
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G20010
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G20010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003008 Tubulin/FtsZ, GTPase domain
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR002453 Beta tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR000217 Tubulin
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR008280 Tubulin/FtsZ, C-terminal
IPR023123 Tubulin, C-terminal
Mapman id Description
20.1.1.2 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin