Gene: PRCOL_00005821
General Information
Structural Information
- Species Prasinoderma coloniale
- Gene Identifier PRCOL_00005821
- Transcript Identifier PRCOL_00005821-RA
- Gene Type Coding gene
- Location Chr14 : 115612-118574 : negative
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D001122
- #Genes/#Species 480/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid PRCOL_00005821-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006099 | IEA | InterPro | tricarboxylic acid cycle | |
| GO:1990641 | ISO | PLAZA Integrative Orthology | response to iron ion starvation | AT4G35830 |
| GO:0006101 | ISO | PLAZA Integrative Orthology | citrate metabolic process | AT4G35830 |
| GO:0006102 | ISO | PLAZA Integrative Orthology | isocitrate metabolic process | AT4G35830 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003994 | IEA | InterPro | aconitate hydratase activity | |
| GO:0051539 | IEA | InterPro | 4 iron, 4 sulfur cluster binding | |
| GO:0048027 | ISO | PLAZA Integrative Orthology | mRNA 5'-UTR binding | AT4G35830 |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT4G35830 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G35830 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G35830 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT4G35830 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G35830 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G35830 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G35830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain |
| IPR006248 | Aconitase, mitochondrial-like |
| IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 |
| IPR036008 | Aconitase, iron-sulfur domain |
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain |
| IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel |
| IPR015932 | Aconitase, domain 2 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |