Gene: PGSC0003DMG402020120

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG402020120
  • Transcript Identifier PGSC0003DMT400051847
  • Gene Type Coding gene
  • Location ST4.03ch06 : 59173267-59180659 : positive

Gene Family Information

  • ID HOM05D003358
  • #Genes/#Species 204/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37450894
  • id PGSC0003DMG402020120.v4.03
  • uniprot M1BSB7

Descriptions

  • Description Zinc finger family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031999
ISO
PLAZA Integrative Orthologynegative regulation of fatty acid beta-oxidation AT1G63900
GO:0031648
ISO
PLAZA Integrative Orthologyprotein destabilization AT1G63900
GO:0002103
ISO
PLAZA Integrative Orthologyendonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) AT1G63900
GO:0009657
ISO
PLAZA Integrative Orthologyplastid organization AT1G63900
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G63900
GO:0045037
ISO
PLAZA Integrative Orthologyprotein import into chloroplast stroma AT1G63900
GO:1904215
ISO
PLAZA Integrative Orthologyregulation of protein import into chloroplast stroma AT1G63900
GO:0016558
ISO
PLAZA Integrative Orthologyprotein import into peroxisome matrix AT1G63900
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006996
IEA
GOA Databaseorganelle organization
GO:0006996
IEA
InterProorganelle organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
ISO
PLAZA Integrative Orthologyprotein dimerization activity AT1G63900
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G63900
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G63900
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005779
ISO
PLAZA Integrative Orthologyintegral component of peroxisomal membrane AT1G63900
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G63900
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G63900
GO:0009707
ISO
PLAZA Integrative Orthologychloroplast outer membrane AT1G63900
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G63900
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044231 E3 ubiquitin-protein ligase SP1-like
IPR022170 E3 Ubiquitin ligase MUL1-like
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
19.2.4.3.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.chloroplast-associated protein degradation (CHLORAD).E3 ubiquitin protein ligase (SP1)