Gene: PGSC0003DMG401020221

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401020221
  • Transcript Identifier PGSC0003DMT400052097
  • Gene Type Coding gene
  • Location ST4.03ch02 : 47821521-47825336 : negative

Gene Family Information

  • ID HOM05D001331
  • #Genes/#Species 472/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37425620
  • id PGSC0003DMG401020221.v4.03
  • uniprot M1BST1

Descriptions

  • Description Sister chromatid cohesion 1 protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007062
IEA
GOA Databasesister chromatid cohesion
GO:0007062
IEA
InterProsister chromatid cohesion
GO:1990414
IBA
GOA Databasereplication-born double-strand break repair via sister chromatid exchange
GO:0007064
IBA
GOA Databasemitotic sister chromatid cohesion
GO:0007130
IBA
GOA Databasesynaptonemal complex assembly
GO:0000278
ISO
PLAZA Integrative Orthologymitotic cell cycle AT5G40840
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G40840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IBA
GOA Databasechromatin binding
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D001331

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
GOA Databasecohesin complex
GO:0008278
IEA
InterProcohesin complex
GO:0034991
IBA
GOA Databasenuclear meiotic cohesin complex
GO:0034990
IBA
GOA Databasenuclear mitotic cohesin complex
GO:0000795
IBA
GOA Databasesynaptonemal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039781 Rad21/Rec8-like protein
IPR006909 Rad21/Rec8-like protein, C-terminal, eukaryotic
IPR023093 ScpA-like, C-terminal
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated