Gene: PGSC0003DMG400031795

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400031795
  • Transcript Identifier PGSC0003DMT400081322
  • Gene Type Coding gene
  • Location ST4.03ch09 : 52915004-52915922 : positive

Gene Family Information

  • ID HOM05D000245
  • #Genes/#Species 1725/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37455263
  • id PGSC0003DMG400031795.v4.03
  • uniprot M1D4K4

Descriptions

  • Description DNA binding protein homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009873
IEA
GOA Databaseethylene-activated signaling pathway
GO:0009873
IEA
InterProethylene-activated signaling pathway
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT2G47520
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene Solyc09g075420.3
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination Solyc09g075420.3
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia AT2G47520
GO:0010104
ISO
PLAZA Integrative Orthologyregulation of ethylene-activated signaling pathway Solyc09g075420.3
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G47520
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT2G47520
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990837
ISO
PLAZA Integrative Orthologysequence-specific double-stranded DNA binding AT2G47520
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044808 Ethylene-responsive transcription factor
IPR001471 AP2/ERF domain
IPR036955 AP2/ERF domain superfamily
IPR016177 DNA-binding domain superfamily
Mapman id Description
15.5.7.1 RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)