Gene: PGSC0003DMG400028270

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400028270
  • Transcript Identifier PGSC0003DMT400072653
  • Gene Type Coding gene
  • Location ST4.03ch10 : 55446625-55448625 : positive

Gene Family Information

  • ID HOM05D001971
  • #Genes/#Species 335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37477471
  • id PGSC0003DMG400028270.v4.03
  • uniprot M1CQQ6

Descriptions

  • Description Crooked neck protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0000398
IBA
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000245
IBA
GOA Databasespliceosomal complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071014
IBA
GOA Databasepost-mRNA release spliceosomal complex
GO:0071007
IBA
GOA DatabaseU2-type catalytic step 2 spliceosome
GO:0000974
IBA
GOA DatabasePrp19 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR003107 HAT (Half-A-TPR) repeat
IPR045075 Pre-mRNA-splicing factor Syf1-like
Mapman id Description
16.2.5.2.6 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component CRN/MAC10