Gene: PGSC0003DMG400027984

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400027984
  • Transcript Identifier PGSC0003DMT400071930
  • Gene Type Coding gene
  • Location ST4.03ch07 : 17996331-18005815 : positive

Gene Family Information

  • ID HOM05D002519
  • #Genes/#Species 269/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37432928
  • id PGSC0003DMG400027984.v4.03
  • uniprot M1CPI0

Descriptions

  • Description Transcription initiation factor IIF subunit beta
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IBA
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006366
IEA
GOA Databasetranscription by RNA polymerase II
GO:0006366
IEA
InterProtranscription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005674
IBA
IEA
GOA Databasetranscription factor TFIIF complex
GO:0005674
IEA
InterProtranscription factor TFIIF complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR011039 Transcription Factor IIF, Rap30/Rap74, interaction
IPR040450 TFIIF beta subunit, HTH domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR003196 Transcription initiation factor IIF, beta subunit
Mapman id Description
15.3.3.4.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIf basal transcription factor heterodimer.subunit beta