Gene: PGSC0003DMG400027619

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400027619
  • Transcript Identifier PGSC0003DMT400071012
  • Gene Type Coding gene
  • Location ST4.03ch11 : 12608556-12613890 : negative

Gene Family Information

  • ID HOM05D003051
  • #Genes/#Species 225/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37464250
  • id PGSC0003DMG400027619.v4.03
  • uniprot M1CN28

Descriptions

  • Description Serine palmitoyltransferase I
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046513
IBA
GOA Databaseceramide biosynthetic process
GO:0030148
ISO
PLAZA Integrative Orthologysphingolipid biosynthetic process AT4G36480
GO:0009825
IEA
GOA Databasemultidimensional cell growth
GO:0009793
IEA
GOA Databaseembryo development ending in seed dormancy
GO:0043067
IEA
GOA Databaseregulation of programmed cell death
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0046512
IBA
GOA Databasesphingosine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G36480
GO:0004758
IBA
GOA Databaseserine C-palmitoyltransferase activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IBA
IEA
GOA Databaseendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004839 Aminotransferase, class I/classII
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
Mapman id Description
5.4.1.1 Lipid metabolism.sphingolipid biosynthesis.serine C-palmitoyltransferase complex.catalytic subunit LCB1