Gene: PGSC0003DMG400021745

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400021745
  • Transcript Identifier PGSC0003DMT400055978
  • Gene Type Coding gene
  • Location ST4.03ch08 : 34198633-34202809 : negative

Gene Family Information

  • ID HOM05D000560
  • #Genes/#Species 984/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37468900
  • id PGSC0003DMG400021745.v4.03
  • uniprot M1BYT5

Descriptions

  • Description Mechanosensitive ion channel domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0050982
IBA
GOA Databasedetection of mechanical stimulus
GO:0006820
IBA
GOA Databaseanion transport
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT5G12080
GO:0097468
ISO
PLAZA Integrative Orthologyprogrammed cell death in response to reactive oxygen species AT5G12080
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT5G19520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008381
IBA
GOA Databasemechanosensitive ion channel activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005886
IBA
IEA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G19520

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016688 Mechanosensitive ion channel MscS-like, plants/fungi
IPR010920 LSM domain superfamily
IPR006685 Mechanosensitive ion channel MscS
IPR023408 Mechanosensitive ion channel MscS domain superfamily
Mapman id Description
24.3.5 Solute transport.channels.mechanosensitive ion channel (MSL)