Gene: PGSC0003DMG400021258

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400021258
  • Transcript Identifier PGSC0003DMT400054762
  • Gene Type Coding gene
  • Location ST4.03ch10 : 2467954-2471103 : negative

Gene Family Information

  • ID HOM05D001621
  • #Genes/#Species 399/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37477373
  • id PGSC0003DMG400021258.v4.03
  • uniprot M1BWU4

Descriptions

  • Description Sec61 transport protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031204
IBA
GOA Databaseposttranslational protein targeting to membrane, translocation
GO:0006616
IBA
GOA DatabaseSRP-dependent cotranslational protein targeting to membrane, translocation
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008320
IBA
GOA Databaseprotein transmembrane transporter activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G34250
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G34250
GO:0005048
IBA
GOA Databasesignal sequence binding
GO:0043022
IBA
GOA Databaseribosome binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G29310
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G78720
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G29310
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G29310
GO:0005789
ISO
PLAZA Integrative Orthologyendoplasmic reticulum membrane AT2G34250
GO:0005784
IBA
GOA DatabaseSec61 translocon complex
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002208 SecY/SEC61-alpha family
IPR023201 SecY domain superfamily
IPR019561 Translocon Sec61/SecY, plug domain
Mapman id Description
23.3.1.3.1 Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit alpha