Gene: AT1G29310

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G29310
  • Transcript Identifier AT1G29310.1
  • Gene Type Coding gene
  • Location Chr1 : 10252662-10254526 : positive

Gene Family Information

  • ID HOM05D001621
  • #Genes/#Species 399/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G29310.1
  • uniprot Q8RWJ5

Descriptions

  • Description SecY protein transport family protein
  • Computational description SecY protein transport family protein; FUNCTIONS IN: P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein secretion, protein transport; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SecY protein (InterPro:IPR002208), Translocon Sec61/SecY, plug domain (InterPro:IPR019561); BEST Arabidopsis thaliana protein match is: SecY protein transport family protein (TAIR:AT2G34250.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0031204
IBA
Gene Ontologyposttranslational protein targeting to membrane, translocation1
GO:0006616
IBA
Gene OntologySRP-dependent cotranslational protein targeting to membrane, translocation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008320
IBA
Gene Ontologyprotein transmembrane transporter activity1
GO:0043022
IBA
Gene Ontologyribosome binding1
GO:0005048
IBA
Gene Ontologysignal sequence binding1
GO:0003729
IDA
Gene OntologymRNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion3
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane4
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus5
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0005784
IBA
Gene OntologySec61 translocon complex1
GO:0000137
HDA
Gene OntologyGolgi cis cisterna6
GO:0005634
HDA
Gene Ontologynucleus7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023201 SecY domain superfamily
IPR002208 SecY/SEC61-alpha family
IPR019561 Translocon Sec61/SecY, plug domain
Mapman id Description
23.3.1.3.1 Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.subunit alpha