Gene: PGSC0003DMG400019888
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400019888
- Transcript Identifier PGSC0003DMT400051201
- Gene Type Coding gene
- Location ST4.03ch07 : 4773025-4777494 : positive
Gene Family Information
- ID HOM05D006474
- #Genes/#Species 123/93
- Phylogenetic origin
- ID ORTHO05D007994
- #Genes/#Species 124/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37433697
- id PGSC0003DMG400019888.v4.03
- uniprot M1BRF2
Descriptions
- Description Choline monooxygenase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044237 | IEA | GOA Database | cellular metabolic process | |
| GO:0044237 | IEA | InterPro | cellular metabolic process | |
| GO:0019285 | IEA | GOA Database | glycine betaine biosynthetic process from choline |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051537 | IEA | GOA Database | 2 iron, 2 sulfur cluster binding | |
| GO:0051537 | IEA | InterPro | 2 iron, 2 sulfur cluster binding | |
| GO:0005506 | IEA | GOA Database | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0019133 | IEA | GOA Database | choline monooxygenase activity | |
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | IEA | GOA Database | chloroplast stroma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036922 | Rieske [2Fe-2S] iron-sulphur domain superfamily |
| IPR015879 | Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain |
| IPR017941 | Rieske [2Fe-2S] iron-sulphur domain |
| IPR001663 | Aromatic-ring-hydroxylating dioxygenase, alpha subunit |
| IPR044637 | Aromatic-ring-hydroxylating dioxygenase |
| Mapman id | Description |
|---|---|
| 9.3.1.1 | Secondary metabolism.betaines.glycinebetaine biosynthesis.choline monooxygenase |