Gene: PGSC0003DMG400015230
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400015230
- Transcript Identifier PGSC0003DMT400039385
- Gene Type Coding gene
- Location ST4.03ch03 : 51432665-51434214 : positive
Gene Family Information
- ID HOM05D000131
- #Genes/#Species 2694/97
- Phylogenetic origin
- ID ORTHO05D000086
- #Genes/#Species 2333/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37460296
- id PGSC0003DMG400015230.v4.03
- uniprot M1B875
Descriptions
- Description Pectate lyase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045490 | IEA | GOA Database | pectin catabolic process | |
| GO:0009624 | ISO | PLAZA Integrative Orthology | response to nematode | AT4G24780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030570 | IEA | GOA Database | pectate lyase activity | |
| GO:0030570 | IEA | InterPro | pectate lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016829 | IEA | GOA Database | lyase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.2 | Cell wall organisation.pectin.modification and degradation.pectate lyase |