Gene: PGSC0003DMG400011199

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400011199
Transcript Identifier PGSC0003DMT400029113
Gene Type Coding gene
Location ST4.03ch07 : 1111289-1113664 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pacid 37432033
id PGSC0003DMG400011199.v4.03
uniprot M1AS88

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080156	ISO	PLAZA Integrative Orthology	mitochondrial mRNA modification	AT4G30700
GO:0000963	ISO	PLAZA Integrative Orthology	mitochondrial RNA processing	AT4G30700
GO:0016554	ISO	PLAZA Integrative Orthology	cytidine to uridine editing	AT4G30700

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G30700
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT4G30700

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.22	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF29)