Gene: PGSC0003DMG400008502
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400008502
- Transcript Identifier PGSC0003DMT400021919
- Gene Type Coding gene
- Location ST4.03ch09 : 168418-171767 : negative
Gene Family Information
- ID HOM05D001301
- #Genes/#Species 483/96
- Phylogenetic origin
- ID ORTHO05D001169
- #Genes/#Species 469/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37457638
- id PGSC0003DMG400008502.v4.03
- uniprot M1AFW4
Descriptions
- Description Conserved gene of unknown function
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0048268 | IBA | GOA Database | clathrin coat assembly | |
| GO:0072583 | IBA | GOA Database | clathrin-dependent endocytosis | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G40060 |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT2G40060 |
| GO:0032050 | IBA | GOA Database | clathrin heavy chain binding | |
| GO:0005198 | IEA | GOA Database | structural molecule activity | |
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT2G40060 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT2G40060 |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0030125 | IBA | GOA Database | clathrin vesicle coat | |
| GO:0030130 | IEA | GOA Database | clathrin coat of trans-Golgi network vesicle | |
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | GOA Database | clathrin coat of coated pit | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
| GO:0005905 | IEA | GOA Database | clathrin-coated pit | |
| GO:0030659 | IEA | GOA Database | cytoplasmic vesicle membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000996 | Clathrin light chain |
| Mapman id | Description |
|---|---|
| 22.3.1.1.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.light chain |