Gene: AT2G40060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G40060
  • Transcript Identifier AT2G40060.1
  • Gene Type Coding gene
  • Location Chr2 : 16726564-16728001 : positive

Gene Family Information

  • ID HOM05D001301
  • #Genes/#Species 483/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G40060.1
  • symbol CLC2
  • full_name clathrin light chain 2
  • uniprot O04209

Descriptions

  • Description Clathrin light chain protein
  • Computational description Clathrin light chain protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Clathrin light chain (InterPro:IPR000996); BEST Arabidopsis thaliana protein match is: Clathrin light chain protein (TAIR:AT3G51890.1); Has 548 Blast hits to 536 proteins in 149 species: Archae - 2; Bacteria - 80; Metazoa - 210; Fungi - 41; Plants - 105; Viruses - 2; Other Eukaryotes - 108 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0072583
IBA
Gene Ontologyclathrin-dependent endocytosis1
GO:0048268
IBA
Gene Ontologyclathrin coat assembly1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
Gene Ontologystructural molecule activity
GO:0005198
IEA
InterProstructural molecule activity
GO:0032050
IBA
Gene Ontologyclathrin heavy chain binding1
GO:0042802
IPI
Gene Ontologyidentical protein binding2
GO:0005515
IPI
Gene Ontologyprotein binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0030132
IEA
Gene Ontologyclathrin coat of coated pit
GO:0030132
IEA
InterProclathrin coat of coated pit
GO:0030130
IEA
Gene Ontologyclathrin coat of trans-Golgi network vesicle
GO:0030130
IEA
InterProclathrin coat of trans-Golgi network vesicle
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005905
IEA
GOA Databaseclathrin-coated pit
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope3
GO:0005886
IDA
IEA
GOA Databaseplasma membrane
GO:0005886
IBA
Gene Ontologyplasma membrane1
GO:0009524
IEA
GOA Databasephragmoplast
GO:0030659
IEA
GOA Databasecytoplasmic vesicle membrane
GO:0030125
IBA
Gene Ontologyclathrin vesicle coat1
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0009504
IDA
Gene Ontologycell plate2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000996 Clathrin light chain
Mapman id Description
22.3.1.1.2 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.light chain