Gene: PGSC0003DMG400008196
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400008196
- Transcript Identifier PGSC0003DMT400021166
- Gene Type Coding gene
- Location ST4.03ch08 : 35228521-35230378 : positive
Gene Family Information
- ID HOM05D000250
- #Genes/#Species 1697/100
- Phylogenetic origin
- ID ORTHO05D000625
- #Genes/#Species 728/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37470455
- id PGSC0003DMG400008196.v4.03
- uniprot M1AEQ1
Descriptions
- Description Eukaryotic initiation factor 4A-14
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G54270 |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc08g062800.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003724 | IBA IEA | GOA Database | RNA helicase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G13920 |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0003723 | IBA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G54270 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G72730 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G72730 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G72730 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G54270 |
| GO:0005730 | IBA | GOA Database | nucleolus | |
| GO:0071013 | IBA | GOA Database | catalytic step 2 spliceosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.4.2.1 | Protein biosynthesis.translation initiation.mRNA loading.mRNA unwinding factor (eIF4A) |