Gene: PGSC0003DMG400007126
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400007126
- Transcript Identifier PGSC0003DMT400018346
- Gene Type Coding gene
- Location ST4.03ch06 : 55175748-55182922 : positive
Gene Family Information
- ID HOM05D001312
- #Genes/#Species 478/99
- Phylogenetic origin
- ID ORTHO05D001832
- #Genes/#Species 349/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37451758
- id PGSC0003DMG400007126.v4.03
- uniprot M1AAG6
Descriptions
- Description DNA binding protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT5G35210 |
| GO:0010019 | ISO | PLAZA Integrative Orthology | chloroplast-nucleus signaling pathway | AT5G35210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G22760 |
| GO:0035064 | ISO | PLAZA Integrative Orthology | methylated histone binding | AT5G35210 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0009707 | ISO | PLAZA Integrative Orthology | chloroplast outer membrane | AT5G35210 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G35210 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.4.2.2.1 | Chromatin organisation.nucleosome remodeling.ISWI chromatin remodeling complexes.ISWI-CDM complex.component DDP |
| 15.5.29 | RNA biosynthesis.transcriptional regulation.transcription factor (PHD) |