Gene: PGSC0003DMG400004955

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400004955
  • Transcript Identifier PGSC0003DMT400012716
  • Gene Type Coding gene
  • Location ST4.03ch04 : 66174794-66179963 : positive

Gene Family Information

  • ID HOM05D000676
  • #Genes/#Species 848/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37475797
  • id PGSC0003DMG400004955.v4.03
  • uniprot M1A1N1

Descriptions

  • Description Xylanase Xyn2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016798
IEA
InterProhydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0031176
ISO
PLAZA Integrative Orthologyendo-1,4-beta-xylanase activity AT1G58370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G58370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044846 Glycoside hydrolase family 10
IPR008979 Galactose-binding-like domain superfamily
IPR001000 Glycoside hydrolase family 10 domain
IPR017853 Glycoside hydrolase superfamily
IPR003305 Carbohydrate-binding, CenC-like
Mapman id Description
21.2.2.2.4 Cell wall organisation.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase