Gene: PGSC0003DMG400004557

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400004557
  • Transcript Identifier PGSC0003DMT400011584
  • Gene Type Coding gene
  • Location ST4.03ch08 : 42508930-42516593 : negative

Gene Family Information

  • ID HOM05D002250
  • #Genes/#Species 299/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37469212
  • id PGSC0003DMG400004557.v4.03
  • uniprot M0ZZS7

Descriptions

  • Description Syntaxin
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061025
ISO
PLAZA Integrative Orthologymembrane fusion AT3G24350
GO:0006906
IBA
GOA Databasevesicle fusion
GO:0006888
IBA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IBA
GOA Databaseintracellular protein transport
GO:0048278
IBA
GOA Databasevesicle docking
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000149
IBA
GOA DatabaseSNARE binding
GO:0005484
IBA
GOA DatabaseSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IBA
GOA DatabaseGolgi membrane
GO:0012505
IBA
GOA Databaseendomembrane system
GO:0016021
IBA
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0031201
IBA
GOA DatabaseSNARE complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000727 Target SNARE coiled-coil homology domain
IPR010989 SNARE
IPR021538 Syntaxin-5, N-terminal, Sly1p-binding domain
Mapman id Description
22.3.5.1.1.3 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP3-group component