Gene: PGSC0003DMG400001808

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400001808
  • Transcript Identifier PGSC0003DMT400004550
  • Gene Type Coding gene
  • Location ST4.03ch01 : 67656557-67658692 : negative

Gene Family Information

  • ID HOM05D001159
  • #Genes/#Species 533/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37441028
  • id PGSC0003DMG400001808.v4.03
  • uniprot M0ZNM4

Descriptions

  • Description Protein transport protein sec23
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0090110
IBA
GOA DatabaseCOPII-coated vesicle cargo loading
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0090114
IEA
GOA DatabaseCOPII-coated vesicle budding
GO:0090114
IEA
InterProCOPII-coated vesicle budding
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001159
GO:0005096
IBA
GOA DatabaseGTPase activator activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070971
IBA
GOA Databaseendoplasmic reticulum exit site
GO:0030127
IBA
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0016020
IEA
GOA Databasemembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0012507
IEA
GOA DatabaseER to Golgi transport vesicle membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006900 Sec23/Sec24, helical domain
IPR007123 Gelsolin-like domain
IPR036175 Sec23/Sec24 helical domain superfamily
IPR037550 Sec23, C-terminal
IPR036180 Gelsolin-like domain superfamily
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR037364 Protein transport protein Sec23
Mapman id Description
22.1.1.1.3.1 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec23