Gene: PGR142G2346

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G2346
  • Transcript Identifier PGR142G2346.01
  • Gene Type Coding gene
  • Location NC_045128.1 : 33895398-33899724 : positive

Gene Family Information

  • ID HOM05D002650
  • #Genes/#Species 259/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031378169.1
  • name LOC116193564
  • name XM_031522309.1
  • id gene-LOC116193564
  • uniprot A0A2I0J833

Descriptions

  • product ATP-dependent RNA helicase SUV3, mitochondrial-like, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT4G14790
GO:0080038
ISO
PLAZA Integrative Orthologypositive regulation of cytokinin-activated signaling pathway Os03g0746500
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G14790
GO:0009939
ISO
PLAZA Integrative Orthologypositive regulation of gibberellic acid mediated signaling pathway Os03g0746500
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation Os03g0746500
GO:1901002
ISO
PLAZA Integrative Orthologypositive regulation of response to salt stress Os03g0746500
GO:0009561
ISO
PLAZA Integrative Orthologymegagametogenesis AT4G14790
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress Os03g0746500
GO:0010929
ISO
PLAZA Integrative Orthologypositive regulation of auxin mediated signaling pathway Os03g0746500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003678
ISO
PLAZA Integrative OrthologyDNA helicase activity Os03g0746500
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0003724
IEA
InterProRNA helicase activity
GO:0016817
IEA
GOA Databasehydrolase activity, acting on acid anhydrides
GO:0016817
IEA
InterProhydrolase activity, acting on acid anhydrides
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G14790
GO:0042645
IEA
GOA Databasemitochondrial nucleoid
GO:0005759
IEA
GOA Databasemitochondrial matrix

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR041082 Suv3, C-terminal domain 1
IPR044774 Suv3, DEXQ-box helicase domain
IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain
Mapman id Description
35.1 not assigned.annotated