Gene: PGR142G0190
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G0190
- Transcript Identifier PGR142G0190.01
- Gene Type Coding gene
- Location NC_045128.1 : 3572595-3573491 : negative
Gene Family Information
- ID HOM05D000244
- #Genes/#Species 1727/95
- Phylogenetic origin
- ID ORTHO05D000179
- #Genes/#Species 1482/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031379626.1
- name LOC116194861
- name XM_031523766.1
- id gene-LOC116194861
- uniprot A0A2I0J8K4
Descriptions
- product AT-hook motif nuclear-localized protein 25
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009938 | ISO | PLAZA Integrative Orthology | negative regulation of gibberellic acid mediated signaling pathway | AT4G35390 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT1G20900 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT1G20900 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT1G20900 |
| GO:0006325 | ISO | PLAZA Integrative Orthology | chromatin organization | AT1G20900 |
| GO:0045824 | ISO | PLAZA Integrative Orthology | negative regulation of innate immune response | AT1G20900 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003680 | IEA | GOA Database | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G35390 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT1G20900 |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT1G20900 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT4G35390 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.8.1 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL) |