Gene: PGR119G1947
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR119G1947
- Transcript Identifier PGR119G1947.01
- Gene Type Coding gene
- Location NC_045132.1 : 3259624-3262258 : positive
Gene Family Information
- ID HOM05D002836
- #Genes/#Species 244/98
- Phylogenetic origin
- ID ORTHO05D003107
- #Genes/#Species 244/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031402264.1
- name LOC116211876
- name XM_031546404.1
- id gene-LOC116211876
- uniprot A0A2I0JLB4
Descriptions
- product eukaryotic translation initiation factor 6-2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042256 | IEA | GOA Database | mature ribosome assembly | |
GO:0042256 | IEA | InterPro | mature ribosome assembly | |
GO:0042273 | IEA | GOA Database | ribosomal large subunit biogenesis | |
GO:0006413 | IEA | GOA Database | translational initiation | |
GO:0006412 | IEA | GOA Database | translation | |
GO:0042254 | IEA | GOA Database | ribosome biogenesis | |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G55620 |
GO:0071215 | ISO | PLAZA Integrative Orthology | cellular response to abscisic acid stimulus | AT3G55620 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0043022 | IEA | GOA Database | ribosome binding | |
GO:0043022 | IEA | InterPro | ribosome binding | |
GO:0003743 | IEA | GOA Database | translation initiation factor activity | |
GO:0043023 | IEA | GOA Database | ribosomal large subunit binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005730 | IEA | GOA Database | nucleolus | |
GO:0005737 | IEA | GOA Database | cytoplasm | |
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G55620 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR002769 | Translation initiation factor IF6 |
Mapman id | Description |
---|---|
17.1.2.2.3.8 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6) |