Gene: PGR102G0289
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR102G0289
- Transcript Identifier PGR102G0289.01
- Gene Type Coding gene
- Location NC_045129.1 : 238397-240258 : positive
Gene Family Information
- ID HOM05D002576
- #Genes/#Species 264/98
- Phylogenetic origin
- ID ORTHO05D002696
- #Genes/#Species 269/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031389359.1
- name LOC116201999
- name XM_031533499.1
- id gene-LOC116201999
- uniprot A0A218W0T5
Descriptions
- product 50S ribosomal protein L21, chloroplastic
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G35680 |
| GO:0010027 | ISO | PLAZA Integrative Orthology | thylakoid membrane organization | AT1G35680 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G35680 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G35680 |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G35680 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0019843 | IEA | GOA Database | rRNA binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G35680 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G35680 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G35680 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G35680 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.2.1.19 | Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL21 |