Gene: PGR083G1711
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR083G1711
- Transcript Identifier PGR083G1711.01
- Gene Type Coding gene
- Location NC_045133.1 : 12065462-12077252 : positive
Gene Family Information
- ID HOM05D001159
- #Genes/#Species 533/100
- Phylogenetic origin
- ID ORTHO05D001712
- #Genes/#Species 366/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031404293.1
- name LOC116213473
- name XM_031548433.1
- id gene-LOC116213473
- uniprot A0A218VUV0
Descriptions
- product protein transport protein SEC23
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006888 | IEA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0090114 | IEA | GOA Database | COPII-coated vesicle budding | |
| GO:0090114 | IEA | InterPro | COPII-coated vesicle budding | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
| GO:0030127 | IEA | GOA Database | COPII vesicle coat | |
| GO:0030127 | IEA | InterPro | COPII vesicle coat | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0012507 | IEA | GOA Database | ER to Golgi transport vesicle membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR037550 | Sec23, C-terminal |
| IPR007123 | Gelsolin-like domain |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR037364 | Protein transport protein Sec23 |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| Mapman id | Description |
|---|---|
| 22.1.1.1.3.1 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec23 |