Gene: PGR083G0484

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G0484
  • Transcript Identifier PGR083G0484.01
  • Gene Type Coding gene
  • Location NC_045133.1 : 4207564-4208578 : positive

Gene Family Information

  • ID HOM05D004494
  • #Genes/#Species 160/75
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031403575.1
  • name LOC116212950
  • name XM_031547715.1
  • id gene-LOC116212950
  • uniprot A0A218VQX7

Descriptions

  • product DNA-directed RNA polymerases II, IV and V subunit 12, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0009860
ISO
PLAZA Integrative Orthologypollen tube growth AT1G53690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT5G41010
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT5G41010
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT5G41010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006591 RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4
IPR029040 RNA polymerase subunit RPABC4/transcription elongation factor Spt4
IPR039747 DNA-directed RNA polymerases I, II, and III subunit RPABC4
Mapman id Description
15.1.6.10 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 12