Gene: PGR044G2707
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G2707
- Transcript Identifier PGR044G2707.01
- Gene Type Coding gene
- Location NC_045134.1 : 3301531-3304014 : negative
Gene Family Information
- ID HOM05D000067
- #Genes/#Species 3957/93
- Phylogenetic origin
- ID ORTHO05D000097
- #Genes/#Species 2160/88
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031371634.1
- name LOC116187167
- name XM_031515774.1
- id gene-LOC116187167
- uniprot A0A6P8BMY1
Descriptions
- product (-)-germacrene D synthase-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | Zm00001eb041770 |
| GO:0016114 | ISO | PLAZA Integrative Orthology | terpenoid biosynthetic process | Zm00001eb413120 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | Zm00001eb041770 |
| GO:0051762 | ISO | PLAZA Integrative Orthology | sesquiterpene biosynthetic process | Zm00001eb413120 |
| GO:1901937 | ISO | PLAZA Integrative Orthology | beta-caryophyllene biosynthetic process | Zm00001eb413120 |
| GO:0002213 | ISO | PLAZA Integrative Orthology | defense response to insect | Zm00001eb413120 |
| GO:0009625 | ISO | PLAZA Integrative Orthology | response to insect | Zm00001eb413120 |
| GO:0045339 | ISO | PLAZA Integrative Orthology | farnesyl diphosphate catabolic process | Zm00001eb413120 |
| GO:0080027 | ISO | PLAZA Integrative Orthology | response to herbivore | Zm00001eb413120 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | Zm00001eb041770 |
| GO:0016106 | ISO | PLAZA Integrative Orthology | sesquiterpenoid biosynthetic process | AT5G23960 |
| GO:0016102 | IEA | GOA Database | diterpenoid biosynthetic process | |
| GO:0016102 | IEA | InterPro | diterpenoid biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080017 | ISO | PLAZA Integrative Orthology | alpha-humulene synthase activity | AT5G23960 |
| GO:0080016 | ISO | PLAZA Integrative Orthology | (-)-E-beta-caryophyllene synthase activity | AT5G23960 |
| GO:0010333 | IEA | GOA Database | terpene synthase activity | |
| GO:0010333 | IEA | InterPro | terpene synthase activity | |
| GO:0016829 | IEA | GOA Database | lyase activity | |
| GO:0016829 | IEA | InterPro | lyase activity | |
| GO:0000287 | IEA | GOA Database | magnesium ion binding | |
| GO:0000287 | IEA | InterPro | magnesium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G48110 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001906 | Terpene synthase, N-terminal domain |
| IPR005630 | Terpene synthase, metal-binding domain |
| IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
| IPR008949 | Isoprenoid synthase domain superfamily |
| IPR036965 | Terpene synthase, N-terminal domain superfamily |
| IPR034741 | Terpene cyclase-like 1, C-terminal domain |
| IPR044814 | Terpene cyclases, class 1, plant |
| Mapman id | Description |
|---|---|
| 9.1.4.2 | Secondary metabolism.terpenoids.terpene biosynthesis.mono-/sesquiterpene-/diterpene synthase |