Gene: PGR044G1786
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR044G1786
- Transcript Identifier PGR044G1786.01
- Gene Type Coding gene
- Location NC_045134.1 : 449416-451985 : positive
Gene Family Information
- ID HOM05D003408
- #Genes/#Species 201/99
- Phylogenetic origin
- ID ORTHO05D003949
- #Genes/#Species 197/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031375265.1
- name LOC116189648
- name XM_031519405.1
- id gene-LOC116189648
- uniprot A0A218VSQ1
Descriptions
- product tryptophan synthase alpha chain-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006568 | IEA | GOA Database | tryptophan metabolic process | |
| GO:0006568 | IEA | InterPro | tryptophan metabolic process | |
| GO:0000162 | IEA | GOA Database | tryptophan biosynthetic process | |
| GO:0009073 | IEA | GOA Database | aromatic amino acid family biosynthetic process | |
| GO:0052544 | ISO | PLAZA Integrative Orthology | defense response by callose deposition in cell wall | AT3G54640 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT3G54640 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G54640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004834 | IEA | GOA Database | tryptophan synthase activity | |
| GO:0004834 | IEA | InterPro | tryptophan synthase activity | |
| GO:0033984 | ISO | PLAZA Integrative Orthology | indole-3-glycerol-phosphate lyase activity | AT4G02610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G54640 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G02610 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.3.5.1 | Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha |