Gene: PGR042G1426
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G1426
- Transcript Identifier PGR042G1426.01
- Gene Type Coding gene
- Location NC_045130.1 : 12733555-12735803 : negative
Gene Family Information
- ID HOM05D007105
- #Genes/#Species 112/93
- Phylogenetic origin
- ID ORTHO05D009304
- #Genes/#Species 105/88
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031394809.1
- name LOC116206160
- name XM_031538949.1
- id gene-LOC116206160
- uniprot A0A6P8DKB5
Descriptions
- product alkylated DNA repair protein ALKBH8 homolog
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002098 | ISO | PLAZA Integrative Orthology | tRNA wobble uridine modification | AT1G31600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027450 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR037151 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |