Gene: PGR042G1254

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR042G1254
  • Transcript Identifier PGR042G1254.01
  • Gene Type Coding gene
  • Location NC_045130.1 : 2124662-2126677 : negative

Gene Family Information

  • ID HOM05D000236
  • #Genes/#Species 1775/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031394257.1
  • name LOC116205746
  • name XM_031538397.1
  • id gene-LOC116205746
  • uniprot A0A218XTY3

Descriptions

  • product AT-hook motif nuclear-localized protein 1-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003680
IEA
GOA Databaseminor groove of adenine-thymine-rich DNA binding
GO:0003680
IEA
InterProminor groove of adenine-thymine-rich DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G12080

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G12080
GO:0098687
ISO
PLAZA Integrative Orthologychromosomal region AT4G12080
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G12080
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G12080
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G12080

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005175 PPC domain
IPR039605 AT-hook motif nuclear-localized protein
Mapman id Description
15.5.8.2 RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-B transcription factor (AHL)