Gene: PGR042G1016

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR042G1016
  • Transcript Identifier PGR042G1016.01
  • Gene Type Coding gene
  • Location NC_045130.1 : 37980938-37982412 : negative

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031392538.1
  • name LOC116204539
  • name XM_031536678.1
  • id gene-LOC116204539
  • uniprot A0A218X2Y8

Descriptions

  • product ubiquitin-60S ribosomal protein L40
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G52590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G36170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT2G36170
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G36170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001975 Ribosomal protein L40e
IPR000626 Ubiquitin-like domain
IPR011332 Zinc-binding ribosomal protein
IPR038587 Ribosomal protein L40e superfamily
IPR019956 Ubiquitin domain
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
17.1.2.1.43 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL40