Gene: PGR031G1979
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR031G1979
- Transcript Identifier PGR031G1979.02
- Gene Type Coding gene
- Location NC_045127.1 : 5058602-5061727 : positive
Gene Family Information
- ID HOM05D005990
- #Genes/#Species 131/98
- Phylogenetic origin
- ID ORTHO05D007908
- #Genes/#Species 125/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031407657.1
- name LOC116215946
- name XM_031551797.1
- id gene-LOC116215946
- uniprot A0A218XA08
Descriptions
- product cytochrome c-type biogenesis ccda-like chloroplastic protein, transcript variant X3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017004 | IEA | GOA Database | cytochrome complex assembly | |
| GO:0017004 | IEA | InterPro | cytochrome complex assembly | |
| GO:0010190 | ISO | PLAZA Integrative Orthology | cytochrome b6f complex assembly | AT5G54290 |
| GO:0045454 | ISO | PLAZA Integrative Orthology | cell redox homeostasis | AT5G54290 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0055035 | ISO | PLAZA Integrative Orthology | plastid thylakoid membrane | AT5G54290 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | AT5G54290 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003834 | Cytochrome C biogenesis protein, transmembrane domain |
| Mapman id | Description |
|---|---|
| 1.1.2.9.2.3 | Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).assembly factor (Ccs5/CcdA) |